Recently, the method which makes data to be converted to a layer diagram has drawn much attention to the educational statistics. These researchers used proper technique to let data present as a hierarchical graph, for example, Forrester diagram and Concept diagram. Thus, presenting data into hierarchical graph is important in data analysis. However, the empirical study shows that if hierarchical graph is over-complex, then it often reduces readability and practicability. Moreover, although nowadays there are many methods to solve the problem above, such as IM method, these methods have their restriction. Thus, our first purpose is to analyze the algorithm problem of IMM by using MATLAB program. Secondly, two methods developed by Liu are studied and compared with IM. Finally, we apply these methods to build hierarchical graph of teaching in the unit of number and count. Our main results are as follows. 1. On the algorithm of IMM, we point out two issues on reducing the number of crossing edges. 2. On the effects of three methods above, we find that the importance index of IMM is less than or equal to that of EPM. And the importance index of EPM is less than or equal to that of EPOM. Secondly, under certain conditions, the effect of IMM, EPM and EPOM is the same. 3. On the application, we propose a hierarchical graph of teaching with high readability. Besides, three important subgroups of concepts concerning number and count are found in this graph.