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題名:有效計算智慧為主的方法用於誘發突變引子設計
書刊名:資訊科技國際期刊
作者:鄭煜輝郭哲男
作者(外文):Cheng, Yu-hueiKuo, Che-nan
出版日期:2017
卷期:11:2
頁次:頁22-29
主題關鍵詞:計算智慧聚合酶鏈鎖反應-限制性片段長度多型性誘發突變引子單一核苷酸多型性限制酶Computational intelligencePCR-RFLPMutagenic primerSNPRestriction enzyme
原始連結:連回原系統網址new window
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  • 點閱點閱:6
期刊論文
1.Ota, M.、Fukushima, H.、Kulski, J. K.、Inoko, H.(2007)。Single Nucleotide Polymorphism Detection by Polymerase Chain Reaction-Restriction Fragment Length Polymorphism。Nat Protoc,2,2857-2864。  new window
2.Cheng, Y. H.、Chuang, L. Y.、Yang, C. H.(2013)。Single Nucleotide Polymorphisms Polymerase Chain Reaction-Restriction Fragment Length Polymorphism Primer Design Using Genetic Algorithm with Fixed and Adaptive Stopping Criteria。Journal of Advanced Mathematics and Applications,2,172-181。  new window
3.Yang, C. H.、Cheng, Y. H.、Chuang, L. Y.(2012)。Mutagenic Primer Design for Mismatch PCRRFLP SNP Genotyping Using A Genetic Algorithm。IEEE/ACM Trans Comput Biol Bioinform,9,837-845。  new window
4.Chuang, L. Y.、Cheng, Y. H.、Yang, C. H.、Yang, C. H.(2013)。Associate PCR-RFLP Assay Design with Snps Based on Genetic Algorithm in Appropriate Parameters Estimation。IEEE Transactions on NanoBioscience,12,119-127。  new window
5.Cheng, Y. H.、Kuo, C. N.、Lai, C. M.(2016)。Effective Natural PCR-RFLP Primer Design for SNP Genotyping Using Teaching-Learning-Based Optimization with Elite Strategy。IEEE Transactions on NanoBioscience,5(7),657-665。  new window
6.Chuang, L. Y.、Yang, C. H.、Cheng, Y. H.、Gu, D. L.、Chang, P. L.、Tsui, K. H.、Chang, H. W.(2006)。V-Mitosnp: Visualization of Human Mitochondrial Snps。BMC Bioinformatics,7,379。  new window
7.Zhang, R.、Zhu, Z.、Zhu, H.、Nguyen, T.、Yao, F.、Xia, K.、Liang, D.、Liu, C.(2005)。SNP Cutter: A Comprehensive Tool for SNP PCR-RFLP Assay Design。Nucleic Acids Res,33,W489-492。  new window
8.Chang, H. W.、Chuang, L. Y.、Cheng, Y. H.、Hung, Y. C.、Wen, C. H.、Gu, D. L.、Yang, C. H.(2009)。Prim-Snping: A Primer Designer for Cost-Effective SNP Genotyping。Biotechniques,46,421-431。  new window
9.Wallace, R. B.、Shaffer, J.、Murphy, R. F.、Bonner, J.、Hirose, T.、Itakura, K.(1979)。Hybridization of Synthetic oligodeoxyribonucleotides to Phi Chi 174 DNA: The Effect of Single Base Pair Mismatch。Nucleic Acids Res,6,3543-3557。  new window
10.Dieffenbach, C. W.、Lowe, T. M.、Dveksler, G. S.(1993)。General Concepts for PCR Primer Design。PCR Methods Appl,3,S30-37。  new window
11.Abd-Elsalam, K. A.(2003)。Bioinformatic Tools and Guideline for PCR Primer Design。African Journal of Biotechnology,2,91-95。  new window
12.Chuang, L. Y.、Cheng, Y. H.、Yang, C. H.(2013)。Specific Primer Design for The Polymerase Chain Reaction。Biotechnol Lett,35,1541-1549。  new window
13.SantaLucia, J. Jr.(1998)。A Unified View of Polymer, Dumbbell, and Oligonucleotide DNA Nearest-Neighbor Thermodynamics。Proc Natl Acad Sci U S A,95,1460-1465。  new window
14.Untergasser, A.、Cutcutache, I.、Koressaar, T.、Ye, J.、Faircloth, B. C.、Remm, M.、Rozen, S. G.(2012)。Primer3-New Capabilities and Interfaces。Nucleic Acids Res,40,e115。  new window
15.Li, L. C.、Dahiya, R.(2002)。Methprimer: Designing Primers for Methylation Pcrs。Bioinformatics,18,1427-1431。  new window
16.You, F. M.、Huo, N. Y.、Gu, Q.、Luo, M. C.、Ma, Y.、Hane, D.、Lazo, G. R.、Dvorak, J.、Anderson, O. D.(2008)。Batchprimer3: A High Throughput Web Application for PCR and Sequencing Primer Design。BMC Bioinformatics,9,253。  new window
17.Arvidsson, S.、Kwasniewski, M.、Riano-Pachon, D. M.、Mueller-Roeber, B.(2008)。Quantprime: A Flexible Tool for Reliable High-Throughput Primer Design for Quantitative PCR。BMC Bioinformatics,9,465。  new window
18.Ye, J.、Coulouris, G.、Zaretskaya, I.、Cutcutache, I.、Rozen, S.、Madden, T. L.(2012)。Primer-BLAST: A Tool to Design Target-Specific Primers for Polymerase Chain Reaction。BMC Bioinformatics,13,134。  new window
19.Cheng, Y. H.(2014)。Computational Intelligence-Based Polymerase Chain Reaction Primer Selection Based on A Novel Teaching-Learning-Based Optimisation。IET Nanobiotechnology,8,238-246。  new window
20.Cheng, Y. H.(2015)。Estimation of Teaching-Learning-Based Optimization Primer Design Using Regression Analysis for Different Melting Temperature Calculations。IEEE Transactions on NanoBioscience,14,3-12。  new window
21.Cheng, Y. H.(2016)。A Novel Teaching-Learning-Based Optimization for Improved Mutagenic Primer Design in Mismatch PCR-RFLP SNP Genotyping。IEEE/ACM Transactions on Computational Biology and Bioinformatics,13,86-98。  new window
22.Haliassos, A.、Chomel, J. C.、Grandjouan, S.、Kruh, J.、Kaplan, J. C.、Kitzis, A.(1989)。Detection Of Minority Point Mutations by Modified PCR Technique: A New Approach for A Sensitive Diagnosis of Tumor-Progression Markers。Nucleic Acids Res,17,8093-8099。  new window
23.Haliassos, A.、Chomel, J. C.、Tesson, L.、Baudis, M.、Kruh, J.、Kaplan, J. C.、Kitzis, A.(1989)。Modification of Enzymatically Amplified DNA for The Detection of Point Mutations。Nucleic Acids Res,17,3606。  new window
24.Rozen, S.、Skaletsky, H.(2000)。Primer3 on The WWW for General Users and For Biologist Programmers。Methods in Molecular Biology,132,365-386。  new window
25.Sakurai, T.、Reichert, J.、Hoffman, E. J.、Cai, G.、Jones, H. B.、Faham, M.、Buxbaum, J. D.(2008)。A Large-Scale Screen for Coding Variants in SERT/SLC6A4 in Autism Spectrum Disorders。Autism Res,1,251-257。  new window
26.Goldberg, T. E.、Kotov, R.、Lee, A. T.、Gregersen, P. K.、Lencz, T.、Bromet, E.、Malhotra, A. K.(2009)。The Serotonin Transporter Gene and Disease Modification in Psychosis: Evidence for Systematic Differences in Allelic Directionality at The 5-HTTLPR Locus。Schizophr Res,111,103-108。  new window
27.Mandelli, L.、Mazza, M.、Martinotti, G.、Di Nicola, M.、Tavian, D.、Colombo, E.、Missaglia, S.、De Ronchi, D.、Colombo, R.、Janiri, Luigi、Serretti, Alessandro(2009)。Harm Avoidance Moderates The Influence of Serotonin Transporter Gene Variants on Treatment Outcome in Bipolar Patients。J Affect Disord,119,205-209。  new window
圖書
1.McPherson, M. J.、Taylor, G. R.、Quirke, P.(1991)。PCR, a practical approach。Oxford University Press。  new window
2.Sambrook J.、Russell, D. W.(2001)。Molecular Cloning: A Laboratory Manual。Cold Spring Harbor Laboratory Press。  new window
 
 
 
 
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