In order to strengthen the mechanism of disaster prevention and rescue exercise, the study sets out to integrate the military joint operations command mechanism and employ the joint operational training system to verify and assess the effectiveness of disaster relief exercise in face of the trends of natural disaster caused by global environmental changes. The goal of the paper is to integrate the joint operation training system and joint model techniques, such as Joint Theater Level Simulation (JTLS), Joint Conflict and Tactical Simulation (JCATS), and Joint Multi-Resolution Model (JMRM), which are original tools used for joint and collaborative (alliance) operation exercise and analysis. In addition, the joint operation command mechanism should be taken into account to support the evaluation of disaster exercise. The study conducts in-depth discussion that seeks to effectively enhance the capability of disaster prevention. In addition, this study intends to build up the ability to deal with the situation, in order to respond the real situation in the future so civilian's life and property can be protected.