Indigenous Peoples in Taiwan has seek for rights of self-governing for a long time, since aborigine's self-governing has become an important policy of Indigenous Peoples everywhere in the world. The United Nations General Assembly had approved United Nations Declaration on the Rights of Indigenous Peoples in Sept. 13, 2007. The declaration had mentioned ”Indigenous peoples have the right of self-determination. By virtue of that right they freely determine their political status and freely pursue their economic, social and cultural development. Indigenous peoples, in exercising their right to self-determination, have the right to autonomy or self-government in matters relating to their internal and local affairs, as well as ways and means for financing their autonomous functions” in the article 3 and article 4 of the declaration. The Amendment of the Constitution in Taiwan emphasized on the government shall protect the status and suffrage of Indigenous Peoples. The Indigenous Peoples Basic Law also protects Indigenous Peoples' rights of self-governing. This article simply analyze the design of Indigenous Peoples' self-governing system, and it focus on legislative agenda of the moving of draft of The Indigenous Peoples Basic Law in the Executive Yuan in Taiwan. And also the different positions of the government, legislators and the relevant groups of indigenous people Law are discussed.