Since both sides of the Taiwan Strait became the official members of the WTO in 2002, what cross-Strait political interactions under the WTO would be and whether the WTO would improve the long-term political confrontation across the Taiwan Strait have been the well concerned issues. This paper is mainly to explore those already occurred political interactions between Taiwan and China under the WTO, by capturing their motivations, contents, and disputes, as well as discovering their implications. Because of the sovereignty competition and dispute, thus far China and Taiwan have had political interactions on such matters as accession names, accession order, member's status, rights, and name. More importantly, these occurred cross-Strait political interactions under the WTO manifest that neither stressing sovereignty nor involving/handling political matters of the WTO indeed has provided both sides of the Taiwan Strait room for political maneuvering. Which has thus allowed unsolved political and sovereignty disputes between China and Taiwan to occur in the WTO, affecting cross-Strait interactions under the WTO by generating unneeded competitions and increasing extra cost. The paper, as a result, concludes that until today the WTO still has not been able to initiate positive/constructive political interactions across the Taiwan Strait, and the current WTO rules still have little impact on cross-Strait political interactions. In this context, what is the dynamic relationship between “international organizations” and “bilateral relationship” might be worth further studying.