In recent years, food safety incidents, because our cause is not heavy penalties Control Manager failed, verify the food safety management standard, ISO 22000 is an international standard effective food security control system, through the circulation mechanism and strict documentation requirements, allowing control pipe mechanism is more perfect. Industrial Development Bureau, Ministry of Economic Affairs in 2015 years on September 23, repeal "food GMP implementation plan" to restructure non-governmental organizations - the Association of Taiwan Food excellent (TQF), included consumer protection, access groups and take tracking and tracing, strengthen auditing, access to international organizations identity and other measures. For this study, a comparative analysis of ISO 22000 and TQF discuss Lack of Food Safety Management, and ISO 22000 import authorization, expert feasibility food security control and auditing mechanisms of the audit, and then amended. Aggregated verify food safety management and food safety and health management laws, and with reference to the four stages of Dr. Yilong Lin DEFSOP Model proposed as the core, the construction of core indicators of food security control and auditing Mechanism. Learn effective control indicators of food security control and inspection of the construction of the mechanism of China's food security control and inspection of. This study shows that Taiwan's food regulations set undistributed not implement risk management and effective implementation of the public authority, test equipment due to funding constraints short, resulting in inspection techniques can not be improved, complicated food inspection program, inspection manpower shortage, professional competence must increase, food control pipe belong to different jurisdictions, different test methods, failed to effectively Control Manager. In this study, the application of integrated ISO 22000, proposes food security control and auditing mechanisms to laboratory (ISO 17025), standard operating procedures ( ISO 22000), inspection and audit personnel (ISO 17024) at the core, the import demand side, the supply side, the environment face, carried PDCA cycle of continuous improvement. In sampling inspection unit, civil audit, government control, three-line duties, and the implementation of food distribution footprint management. 2014 as amended in February, "Act Governing Food Safety and Sanitation", has been incorporated into the "food three quality control" concept.