Since the EU’s Committee of the Regions (CoR) was set up on the legal basis of the Treaty on European Union in 1992, more and more European scholars have been discussing these topics, such as “the third level of the EU” and “Multi-level governance in the EU”. So the concept of multi-level has become a trend in European studies. The aim of my paper is to take the German Land, Niedersachsen as an example to review it’s participation in the European structural funds’ reform and implementation, as well as to further review the formation of “Multi-level governance in the EU”. Although the European Structural funds belong to the regional policy of the EU, the scope of these funds is relatively extensive. The objectives of these funds aim to solve the structural problems in the member states of the EU, such as employment issues, economic development, and the member states’ interests. Observing the process in the European structural funds reforms shows the thee are three characteristics of EU governance: (1) the EU intergovernmental nature; (2) the management of the Commission in the structural funds posits the supranational theories of the EU; (3) the participation of the local level of the member states shows the third level of the multi-level governance. The above-mentioned interaction of the supranational, governmental and local levels obviously demonstrates the practice of the “multi-level governance in the EU”.