In the early period of Taiwan under Japanese occupation, the Japanese concentrated on keeping peace among the society and began the basic research upon lands and resources. Around 1900, Japanese General government in Taiwan established the "Agricultural Taiwan" industrial approach, which developed basically on rice and sugar. In order to pursue the "rice and sugar policy", all the concerned conditions, such as the development of the lands, the foundation of irrigation, the improvement of the seeds, the extinguishment of pests, and the advance of agricultural tools, must be cooperated. Judging from the natural environment of Taiwan, the control of irrigation is no doubt the most important one in developing agriculture, therefore the policy of agricultural development in the whole period of Japanese occupation basically focused on irrigation. In the past, the irrigation institutions were private as a whole, which management were either taken care by the corporations like today, or governed automatically by irrigators who signed together certain contracts; both were highly self-governing. The question about how the Japanese incorporated the irrigation facilities which belonged to the private possessions into public property and build the own irrigation business of General government after they came to Taiwan, is a subject worthwhile for research. This article takes Chia-nan Irrigation System as an example to examine the building and operation of Taiwan’s irrigation business in the period of Taiwan under Japanese occupation.